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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs66841633 chr6:27382386 G/T BTN3A2 chr6:26365387-26378548:+ -0.69 -10.36 8.1E-23 Box Plot
THCA rs66841633 chr6:27382386 G/T ZFP57 chr6:29640169-29648887:- 0.78 8.01 8.89E-15 Box Plot
THCA rs66866015 chr13:82102840 AG/A LHX1 chr17:35294084-35301912:+ 0.32 6.3 6.67E-10 Box Plot
THCA rs66868086 chr6:27865902 A/T BTN3A2 chr6:26365387-26378548:+ -0.88 -12.41 7.59E-31 Box Plot
THCA rs66868086 chr6:27865902 A/T RNF5P1 chr8:38458179-38458718:- 0.71 6.14 1.76E-9 Box Plot
THCA rs66868086 chr6:27865902 A/T ZFP57 chr6:29640169-29648887:- 0.93 8.67 6.69E-17 Box Plot
THCA rs668701 chr11:77583476 C/T INTS4L1 chr7:64601603-64694600:+ 0.61 9.55 6.87E-20 Box Plot
THCA rs66886492 chr6:28089731 C/T BTN3A2 chr6:26365387-26378548:+ -0.84 -11.48 3.98E-27 Box Plot
THCA rs66886492 chr6:28089731 C/T RNF5P1 chr8:38458179-38458718:- 0.75 6.44 2.91E-10 Box Plot
THCA rs66886492 chr6:28089731 C/T ZFP57 chr6:29640169-29648887:- 0.98 9.08 2.94E-18 Box Plot
THCA rs6690362 chr1:209608020 C/A KIAA1310 chr2:97258916-97304115:- -0.24 -6.04 3.06E-9 Box Plot
THCA rs66903818 chr17:18199388 A/C LOC162632 chr17:16614993-16707819:+ 0.39 6.41 3.47E-10 Box Plot
THCA rs6691817 chr1:121272544 T/G NBPF14 chr1:148003642-148025863:- 0.39 9.01 4.78E-18 Box Plot
THCA rs669340 chr17:18263957 C/G LOC162632 chr17:16614993-16707819:+ -0.37 -6.44 2.99E-10 Box Plot
THCA rs66935815 chr2:132253973 G/A CCDC74B chr2:130896860-130902707:- 0.35 6.86 2.12E-11 Box Plot